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Explainable Artificial Intelligence Helps in Understanding the Effect of Fibronectin on Survival of Sepsis

Author
Adamik, Barbara
Gozdzik, Waldemar
Tyszko, Maciej
Skalec, Tomasz
Biecek, Przemysław
Kobylińska, Katarzyna
Krzyżanowska-Gołąb, Dorota
Lemańska-Perek, Anna
Publication date
2022
Abstract (EN)

Fibronectin (FN) plays an essential role in the host’s response to infection. In previous studies, a significant decrease in the FN level was observed in sepsis; however, it has not been clearly elucidated how this parameter affects the patient’s survival. To better understand the relationship between FN and survival, we utilized innovative approaches from the field of explainable machine learning, including local explanations (Break Down, Shapley Additive Values, Ceteris Paribus), to understand the contribution of FN to predicting individual patient survival. The methodology provides new opportunities to personalize informative predictions for patients. The results showed that the most important indicators for predicting survival in sepsis were INR, FN, age, and the APACHE II score. ROC curve analysis showed that the model’s successful classification rate was 0.92, its sensitivity was 0.92, its positive predictive value was 0.76, and its accuracy was 0.79. To illustrate these possibilities, we have developed and shared a web-based risk calculator for exploring individual patient risk. The web application can be continuously updated with new data in order to further improve the model.

PBN discipline
computer and information sciences
Journal
Cells
Volume
11
Issue
15
Pages from-to
2433
Open access license
Closed access