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MAPIYA contact map server for identification and visualization of molecular interactions in proteins and biological complexes

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cris.lastimport.scopus2024-02-12T20:43:37Z
dc.abstract.enCorrect identification and effective visualization of interactions in biomolecular structures facilitate understanding of their functions and molecular design. In response to the practical needs of structure-based analysis, we have created a Mapiya web server. The Mapiya integrates four main functionalities: (i) generation of contact maps - intramolecular and intermolecular - for proteins, nucleic acids, and their complexes; (ii) characterization of the interactions physicochemical nature, (iii) interactive visualization of biomolecular conformations with automatic zoom on selected contacts using Molstar and (iv) additional sequence- and structure-based analyses performed with third-party software and in-house algorithms combined into an easy-to-use interface. Thus, Mapiya offers a highly customized analysis of the molecular interactions' in various biological systems. The web server is available at: http://mapiya.lcbio.pl/
dc.affiliationUniwersytet Warszawski
dc.contributor.authorKurciński, Mateusz
dc.contributor.authorKmiecik, Sebastian
dc.contributor.authorWroblewski, Karol
dc.contributor.authorChandran, Nithin
dc.contributor.authorBadaczewska-Dawid, Aleksandra E
dc.date.accessioned2024-01-25T05:32:44Z
dc.date.available2024-01-25T05:32:44Z
dc.date.copyright2023-05-07
dc.date.issued2022
dc.description.accesstimeAT_PUBLICATION
dc.description.financeNie dotyczy
dc.description.numberW1
dc.description.versionFINAL_PUBLISHED
dc.description.volume50
dc.identifier.doi10.1093/NAR/GKAC307
dc.identifier.issn0305-1048
dc.identifier.urihttps://repozytorium.uw.edu.pl//handle/item/111799
dc.identifier.weblinkhttps://academic.oup.com/nar/article-pdf/50/W1/W474/44376554/gkac307.pdf
dc.languageeng
dc.pbn.affiliationchemical sciences
dc.relation.ispartofNucleic Acids Research
dc.relation.pagesW474-W482
dc.rightsCC-BY
dc.sciencecloudnosend
dc.titleMAPIYA contact map server for identification and visualization of molecular interactions in proteins and biological complexes
dc.typeJournalArticle
dspace.entity.typePublication